However, the final report on the satellite pilot - finished in April 2017 and made public two months later - covered a shorter period and a more narrow geographical range than Ms Slattery's work. The report also used poorer quality imagery than was available.

"I was told [senior management] wanted to shut the whole thing down," said Ms Slattery, now a senior water policy researcher at The Australia Institute.

The comments come during a week when the Senate voted in support of a Greens-led motion to block modifications to the $13 billion Murray-Darling Basin Plan.

The amendment would have reduced the amount of water savings intended for the environment for the northern basin - including the region where the satellite imagery was collected - by 70 billion litres a year to 320 billion litres.

The authority told Fairfax Media it had begun testing the Data Cube in March 2016 to see if it could be used to track water flow.

"The original draft report from this work made quite a few assumptions," a spokeswoman said.

"The report went through a peer-review process internally, as do all MDBA technical reports," she said. "The peer review found that the technology was promising but more was required to turn the information into evidence of any illegal actions."

Ms Slattery, who left the authority in August 2016 to join the Commonwealth Environmental Water Holder, dismissed the response as "complete crap", adding "they don't use a 'peer-review process' in a way anyone else does".

Quentin Grafton, a professor specialising in water policy at the Australian National University, said the apparent downplaying of satellite monitoring underscored the poor understanding of water use in the basin.

He pointed to an authority report from last November that noted as little as 25 per cent of the northern basin's water use is monitored, compared with 96 per cent in South Australia.

“If you can’t get the basics right, don’t expect to get anything else right,” said Professor Grafton, adding that modelling used by the authority was by extension also suspect.

The original National Water Plan for Water Security, launched in 2007 by then Prime Minister John Howard earmarked $417.2 million to improve water information.

"Where did that money go, who got it, and why is that up to 75 per cent of the northern basin is still not metered," Professor Grafton said.